loc1.cc File Reference

#include "tiff.hh"
#include "nelder_mead.hxx"
#include "utils.hh"
#include <iostream>
#include <cmath>

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Classes
class	Likelihood
	Functor for likelihood calculation. More...
struct	Particle
	Detected particle. More...

Typedefs
typedef std::array< double, 5 >	param_t
	Type for fitting parameters.

Functions
double	psf_ig2 (double x, double y, param_t const &p)
	Point-spread function with integrated Gaussian.
std::vector< Particle >	process_image (double const *data, int w, int h)
	Process a single 2D image. More...
int	main (int argc, char **argv)
	Main function for localization.

Variables
double	i2p = 3.6
	intensity to photon scale
double	plsz = 80
	pixel size in nm
int	fwr = 4
	fitting window range

Detailed Description

Author

Chun-Chung Chen <cjj@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du>

Definition in file loc1.cc.

Function Documentation

process_image()

std::vector<Particle> process_image	(	double const *	data,
		int	w,
		int	h
	)

Process a single 2D image.

Parameters

data	image data
w	image width
h	image height

Definition at line 62 of file loc1.cc.